PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00015.1.g01110.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 282aa    MW: 28969.4 Da    PI: 11.6814
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00015.1.g01110.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like391.7e-12248276230
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPk 30 
                                   pr+rWt++LH+rFv+ave LGG+e+  P 
  Zjn_sc00015.1.g01110.1.am.mk 248 PRMRWTSTLHSRFVHAVELLGGHERESPP 276
                                   9***********************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-8246275IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MEAAASAPDL SLHISLPSSN NAASPSSSGL GLGSGGAGGR GPVAGEDPWR RLNGSTASTE  60
LSLSPPPPLR QEGGAGALPW RLRPTAANSP SSSSSASSAG AAFVPVTVPR LSLDAAASAE  120
AARARPINGV PVYSSLAAGS PFLGAGDYRQ RHAKVGLYNP YPSSAWPASL RSTTAAAPAS  180
VDTTATAAFL SPSAYNRMLS GTGRLHLHGA FADTLRGYGG RHQHFGGSLA SSRYMPRLPA  240
SRRGMRAPRM RWTSTLHSRF VHAVELLGGH ERESPPQLGF SL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004973472.19e-96PREDICTED: probable transcription factor RL9
SwissprotQ0J2356e-37ROLL9_ORYSJ; Probable transcription factor RL9
TrEMBLK3YHJ89e-96K3YHJ8_SETIT; Uncharacterized protein
STRINGSi013716m3e-95(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25583787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.15e-19G2-like family protein